1 IL_8GLP_339 8GLP 0.5019 1 Other IL S2 SSU rRNA C 1750 C 1751 C 1752 C 1753 * G 1780 A 1781 G 1782 G 1784 cWW ncWS cWW
2 IL_8CRE_397 8CRE 0.2532 0 Tandem non-canonical cWW pairs CM SSU rRNA U 300 U 301 U 302 C 303 * G 109 U 110 U 111 A 112 cWW cwW cWw cWW
3 IL_9PN5_149 9PN5 0.2497 0 Tandem non-canonical cWW pairs B5 SSU rRNA PSU 302 U 303 U 304 C 305 * G 109 U 110 U 111 A 112 cWW cwW cWw cWW
4 IL_9H3G_162 9H3G 0.2362 0 Tandem non-canonical cWW pairs h1 SSU rRNA PSU 304 U 305 U 306 C 307 * G 110 U 111 U 112 A 113 cWW cwW cWw cWW
5 IL_9SUM_144 9SUM 0.2404 0 Tandem non-canonical cWW pairs (H) CA SSU rRNA U 291 U 292 U 293 C 294 * G 108 U 109 U 110 A 111 cWW cwW cWw cWW
6 IL_5C5W_001 5C5W 0.2185 0 Tandem non-canonical cWW pairs A RNA (19-mer) C 15||||5_556 U 16||||5_556 A 17||||5_556 G 18||||5_556 * C 2 C 3 U 4 G 5 cWW cwW cWW cWW
7 IL_8GLP_220 8GLP 0.2438 0 Tandem non-canonical cWW pairs S2 SSU rRNA U 581 U 582 A 583 A 584 * U 566 C 567 C 568 A 569 cWW ncWW ncWS cWW
8 IL_8GLP_294 8GLP 0.2974 0 Tandem non-canonical cWW pairs L5 LSU rRNA PSU 1781 PSU 1782 C 1783 U 1784 * A 1746 U 1747 U 1748 A 1749 cWW cwW cWW
9 IL_8HNT_001 8HNT 0.2426 0 Tandem non-canonical cWW pairs B sgRNA C 32 U 33 C 34 C 35 * G 54 U 55 U 56 G 57 cWW cwW ncWS cWW
10 IL_6JDV_001 6JDV 0.2221 0 Tandem non-canonical cWW pairs B CRISPR RNA direct repeat element C 32 U 33 C 34 C 35 * G 66 U 67 U 68 G 69 cWW cwW ncWS cWW
11 IL_9H3G_047 9H3G 0.2585 0 Tandem non-canonical cWW pairs A LSU rRNA U 1051 U 1052 C 1053 PSU 1054 * A 1017 U 1018 U 1019 A 1020 cWW cwW ncWS cWW
12 IL_9PN5_040 9PN5 0.2607 0 Tandem non-canonical cWW pairs; U in syn A1 LSU rRNA U 1041 PSU 1042 C 1043 U 1044 * A 1006 U 1007 U 1008 A 1009 cWW cWW
13 IL_9SUM_040 9SUM 0.2487 0 Tandem non-canonical cWW pairs; U in syn (H) A LSU rRNA U 988 U 989 C 990 U 991 * A 953 U 954 U 955 A 956 cWW cwW cWW
14 IL_8OI5_044 8OI5 0.2423 0 Tandem non-canonical cWW pairs 1 LSU rRNA U 1037 U 1038 C 1039 U 1040 * A 1002 U 1003 U 1004 A 1005 cWW cwW ncWS ncWW
15 IL_8UIW_002 8UIW 0.2213 0 Tandem non-canonical cWW pairs N azaaromatic riboswitch aptamer (yjdF RNA) G 112 U 113 C 114 G 115 * C 100 U 101 U 102 C 103 cWW cwW cWW
16 IL_9PN5_230 9PN5 0.1766 0 Tandem non-canonical cWW pairs B5 SSU rRNA C 1675 U 1676 C 1677 A 1678 * U 1723 U 1724 U 1725 G 1726 cWW cwW cWW
17 IL_4EYA_003 4EYA 0.2055 0 Tandem non-canonical cWW pairs f+e RNA (12-mer) C 6 U 7 U 8 G 9 * C 6 U 7 U 8 G 9 cWW cwW cWw cWW
18 IL_3R2D_002 3R2D 0.1301 0 Tandem non-canonical cWW pairs S+R RNA (12-mer) C 6 U 7 U 8 G 9 * C 6 U 7 U 8 G 9 cWW cwW cWw cWW
19 IL_6MWN_005 6MWN 0.1345 0 Tandem non-canonical cWW pairs B IRES A 643 U 644 U 645 G 646 * C 661 U 662 U 663 U 664 cWW cwW cWw cWW
20 IL_9PN5_124 9PN5 0.1619 0 Tandem non-canonical cWW pairs A1 LSU rRNA C 3235 U 3236 U 3237 G 3238 * C 3249 U 3250 U 3251 G 3252 cWW cwW cWw cWW
21 IL_8OI5_125 8OI5 0.1603 0 Tandem non-canonical cWW pairs 1 LSU rRNA U 3214 U 3215 U 3216 G 3217 * C 3200 U 3201 U 3202 A 3203 cWW cwW cWw cWW
22 IL_8OI5_057 8OI5 0.1327 0 Tandem non-canonical cWW pairs 1 LSU rRNA A 1339 U 1340 U 1341 G 1342 * C 1354 U 1355 U 1356 U 1357 cWW cwW cWw cWW
23 IL_4UYK_003 4UYK 0.1412 0 Tandem non-canonical cWW pairs R SRP RNA G 81 U 82 U 83 C 84 * G 117 U 118 U 119 C 120 cWW cwW cWw cWW
24 IL_8ID2_001 8ID2 0.0000 0 Tandem non-canonical cWW pairs C RNA (24-mer) A 5 C 6 U 7 G 8 * C 17 U 18 U 19 U 20 cWW ncWW cWW cWw cWW
25 IL_9H3G_242 9H3G 0.1150 0 Tandem non-canonical cWW pairs h1 SSU rRNA G 1677 U 1678 U 1679 C 1680 * G 1727 U 1728 C 1729 C 1730 cWW cWW cWw cWW
26 IL_8CRE_475 8CRE 0.1358 0 Tandem non-canonical cWW pairs CM SSU rRNA G 1710 C 1711 U 1712 G 1713 * C 1662 U 1663 C 1664 C 1665 cWW ncWw cWw cWW
27 IL_9SUM_225 9SUM 0.1600 0 Tandem non-canonical cWW pairs (H) CA SSU rRNA G 1698 C 1699 U 1700 G 1701 * C 1650 U 1651 C 1652 C 1653 cWW cwW cWw cWW
28 IL_9H3G_240 9H3G 0.2204 0 Tandem non-canonical cWW pairs h1 SSU rRNA U 1666 C 1667 C 1668 G 1669 * C 1738 U 1739 U 1740 A 1741 cWW cWW cWW cWW
29 IL_4XW0_002 4XW0 0.2987 0 Tandem non-canonical cWW pairs A+B RNA (10-mer) C 2 C 3 U 4 LCG 5 * C 2 C 3 U 4 LCG 5 cWW cWW cWW cWW
30 IL_4K27_003 4K27 0.3739 0 Tandem non-canonical cWW pairs U Myotonic Dystrophy Type 2 RNA C 41 C 42 U 43 G 44 * C 12 C 13 U 14 G 15 cWW cWW cWW cWW
31 IL_4K27_002 4K27 0.4056 0 Tandem non-canonical cWW pairs U Myotonic Dystrophy Type 2 RNA C 45 C 46 U 47 G 48 * C 8 C 9 U 10 G 11 cWW cWW cWW cWW
32 IL_8X5V_001 8X5V 0.2957 0 Tandem non-canonical cWW pairs B RNA (110-mer) U 28 U 29 C 30 C 31 * G 40 U 41 U 42 G 43 cWW cwW cWW cWW
33 IL_5EW4_002 5EW4 0.2902 0 Tandem non-canonical cWW pairs B+A RNA (22-mer) C 8 C 9 C 10 G 11 * C 14 C 15 C 16 G 17 cWW ncBW ncBW cWW
34 IL_8FER_001 8FER 0.2918 0 Tandem non-canonical cWW pairs AAA+BBB RNA 16mer with two continuous s(2)U G 7 SUR 8 SUR 9 C 10 * G 7 SUR 8 SUR 9 C 10 cWW cWw cWw cWW
35 IL_7A0S_040 7A0S 0.2063 0 Tandem non-canonical cWW pairs X LSU rRNA A 1175 U 1176 U 1177 C 1178 * G 1196 U 1197 C 1198 U 1199 cWW cWW ncWw cWW
36 IL_3TZR_003 3TZR 0.2215 0 Tandem non-canonical cWW pairs A+B RNA (20-mer) + RNA (16-mer) C 62 U 63 U 64 C 65 * G 102 U 103 C 104 G 105 cWW cWW cWw cWW
37 IL_2PN3_004 2PN3 0.2375 0 Tandem non-canonical cWW pairs A+B RNA (24-mer) + RNA (20-mer) C 62 U 63 U 64 C 65 * G 102 U 103 C 104 G 105 cWW cWW cWw cWW
38 IL_9PN5_125 9PN5 0.1926 0 Tandem non-canonical cWW pairs A1 LSU rRNA U 3300 U 3301 U 3302 G 3303 * C 3311 U 3312 U 3313 A 3314 cWW cwW cWw cWW
39 IL_9SUM_120 9SUM 0.2525 0 Tandem non-canonical cWW pairs (H) A LSU rRNA U 3188 U 3189 U 3190 G 3191 * C 3199 U 3200 U 3201 A 3202 cWW cwW cwW cWW
40 IL_9AXU_117 9AXU 0.2845 0 Tandem non-canonical cWW pairs 2 LSU rRNA C 3412 U 3413 U 3414 U 3415 * A 3401 U 3402 U 3403 G 3404 cWW cWw cWw cWW
41 IL_9H3G_140 9H3G 0.3039 0 Tandem non-canonical cWW pairs A LSU rRNA C 3298 OMU 3299 U 3300 A 3301 * U 3287 U 3288 U 3289 OMG 3290 ncWW cWW cWw cWw cWW
42 IL_8OI5_126 8OI5 0.2714 0 Tandem non-canonical cWW pairs 1 LSU rRNA C 3276 U 3277 U 3278 A 3279 * U 3265 U 3266 U 3267 G 3268 cWW cWw cWw cWW
43 IL_8GLP_319 8GLP 0.3745 0 Tandem non-canonical cWW pairs L5 LSU rRNA PSU 4972 U 4973 C 4974 G 4975 * C 4983 C 4984 U 4985 G 4986 cWW cwW cWw cWW
