IL_22TU_222

3D structure

PDB id

22TU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome in complex with DHX29

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GCUAG*CUUGGACC

Length

13 nucleotides

Bulged bases

22TU|1|S2|G|970

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

22TU|1|S2|G|952
22TU|1|S2|C|953
22TU|1|S2|U|954
22TU|1|S2|A|955
22TU|1|S2|G|956
*
22TU|1|S2|C|967
22TU|1|S2|U|968
22TU|1|S2|U|969
22TU|1|S2|G|970
22TU|1|S2|G|971
22TU|1|S2|A|972
22TU|1|S2|C|973
22TU|1|S2|C|974

Current chains

Chain S2

18S rRNA

Nearby chains

Chain L5

Large subunit ribosomal RNA; LSU rRNA

Chain SB

40S ribosomal protein S3a

Chain SO

40S ribosomal protein S14