IL_23WI_003
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CAACC*GCAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_003 not in the Motif Atlas
- Geometric match to IL_9H3G_004
- Geometric discrepancy: 0.1887
- The information below is about IL_9H3G_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87767.4
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
23WI|1|5|C|898
23WI|1|5|A|899
23WI|1|5|A|900
23WI|1|5|C|901
23WI|1|5|C|902
*
23WI|1|A|G|875
23WI|1|A|C|876
23WI|1|A|A|877
23WI|1|A|A|878
23WI|1|A|G|879
Current chains
- Chain 5
- RNA (2014-MER)
- Chain A
- 16S rRNA
Nearby chains
- Chain M
- 50S ribosomal protein L16
Coloring options: