IL_23WI_027
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CCAAC*GGG
- Length
- 8 nucleotides
- Bulged bases
- 23WI|1|5|G|1332
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_027 not in the Motif Atlas
- Homologous match to IL_7A0S_047
- Geometric discrepancy: 0.2625
- The information below is about IL_7A0S_047
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_06671.3
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 11
Unit IDs
23WI|1|5|C|1319
23WI|1|5|C|1320
23WI|1|5|A|1321
23WI|1|5|A|1322
23WI|1|5|C|1323
*
23WI|1|5|G|1331
23WI|1|5|G|1332
23WI|1|5|G|1333
Current chains
- Chain 5
- RNA (2014-MER)
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain S
- 50S ribosomal protein L22
- Chain T
- 50S ribosomal protein L23
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