IL_23WI_029
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CUAAG*CGAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_029 not in the Motif Atlas
- Geometric match to IL_8B0X_111
- Geometric discrepancy: 0.092
- The information below is about IL_8B0X_111
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_89021.4
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
23WI|1|5|C|1351
23WI|1|5|U|1352
23WI|1|5|A|1353
23WI|1|5|A|1354
23WI|1|5|G|1355
*
23WI|1|5|C|1376
23WI|1|5|G|1377
23WI|1|5|A|1378
23WI|1|5|U|1379
23WI|1|5|G|1380
Current chains
- Chain 5
- RNA (2014-MER)
Nearby chains
- Chain 2
- 50S ribosomal protein L34
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain C
- Large ribosomal subunit protein uL2
Coloring options: