IL_23WI_033

3D structure

PDB id

23WI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

23WI|1|5|A|1420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_23WI_033 not in the Motif Atlas

Homologous match to IL_7A0S_051

Geometric discrepancy: 0.4681

The information below is about IL_7A0S_051

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_08938.3

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

24

Unit IDs

23WI|1|5|C|1417
23WI|1|5|G|1418
23WI|1|5|A|1419
23WI|1|5|A|1420
23WI|1|5|G|1421
*
23WI|1|5|C|1577
23WI|1|5|U|1578
23WI|1|5|A|1579
23WI|1|5|A|1580
23WI|1|5|G|1581

Current chains

Chain 5

RNA (2014-MER)

Nearby chains