IL_23WI_036

3D structure

PDB id

23WI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

UAAG*UGAUG

Length

9 nucleotides

Bulged bases

23WI|1|5|U|1523

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_23WI_036 not in the Motif Atlas

Geometric match to IL_8B0X_118

Geometric discrepancy: 0.0962

The information below is about IL_8B0X_118

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.5

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

23WI|1|5|U|1468
23WI|1|5|A|1469
23WI|1|5|A|1470
23WI|1|5|G|1471
*
23WI|1|5|U|1520
23WI|1|5|G|1521
23WI|1|5|A|1522
23WI|1|5|U|1523
23WI|1|5|G|1524

Current chains

Chain 5

RNA (2014-MER)

Nearby chains