IL_23WI_044
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GGAACUAGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_044 not in the Motif Atlas
- Geometric match to IL_8B0X_180
- Geometric discrepancy: 0.0471
- The information below is about IL_8B0X_180
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80252.3
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 11
Unit IDs
23WI|1|5|G|1666
23WI|1|5|G|1667
23WI|1|5|A|1668
23WI|1|5|A|1669
23WI|1|5|C|1670
23WI|1|5|U|1671
23WI|1|5|A|1672
23WI|1|5|G|1673
23WI|1|5|G|1674
*
23WI|1|5|C|1990
23WI|1|5|U|1991
23WI|1|5|G|1992
23WI|1|5|U|1993
23WI|1|5|C|1994
Current chains
- Chain 5
- RNA (2014-MER)
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain D
- Large ribosomal subunit protein uL3
- Chain K
- Large ribosomal subunit protein uL14
Coloring options: