IL_23WI_087
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GGUG*CUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_087 not in the Motif Atlas
- Geometric match to IL_8B0X_169
- Geometric discrepancy: 0.0618
- The information below is about IL_8B0X_169
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60988.4
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
23WI|1|5|G|2843
23WI|1|5|G|2844
23WI|1|5|U|2845
23WI|1|5|G|2846
*
23WI|1|5|C|2870
23WI|1|5|U|2871
23WI|1|5|A|2872
23WI|1|5|A|2873
23WI|1|5|C|2874
Current chains
- Chain 5
- RNA (2014-MER)
Nearby chains
- Chain D
- Large ribosomal subunit protein uL3
- Chain N
- Large ribosomal subunit protein bL17
- Chain P
- 50S ribosomal protein L19
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