IL_23WI_095
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CCAGUAG*CGAACG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_095 not in the Motif Atlas
- Geometric match to IL_8B0X_071
- Geometric discrepancy: 0.0822
- The information below is about IL_8B0X_071
- Detailed Annotation
- 7x6 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_02666.3
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 18
Unit IDs
23WI|1|A|C|239
23WI|1|A|C|240
23WI|1|A|A|241
23WI|1|A|G|242
23WI|1|A|U|243
23WI|1|A|A|244
23WI|1|A|G|245
*
23WI|1|A|C|253
23WI|1|A|G|254
23WI|1|A|A|255
23WI|1|A|A|256
23WI|1|A|C|257
23WI|1|A|G|258
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 3
- 50S ribosomal protein L35
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain L
- Large ribosomal subunit protein uL15
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