IL_23WI_100
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GGAG*UGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_100 not in the Motif Atlas
- Geometric match to IL_8B0X_076
- Geometric discrepancy: 0.0708
- The information below is about IL_8B0X_076
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.4
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 45
Unit IDs
23WI|1|A|G|536
23WI|1|A|G|537
23WI|1|A|A|538
23WI|1|A|G|539
*
23WI|1|A|U|554
23WI|1|A|G|555
23WI|1|A|A|556
23WI|1|A|C|557
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain J
- 50S ribosomal protein L13
- Chain Q
- 50S ribosomal protein L20
Coloring options: