IL_23WI_126
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 23WI|1|a|U|173
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_126 not in the Motif Atlas
- Homologous match to IL_6CZR_121
- Geometric discrepancy: 0.443
- The information below is about IL_6CZR_121
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.5
- Basepair signature
- cWW-L-R-tWH-tWH-tHW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
23WI|1|a|G|147
23WI|1|a|G|148
23WI|1|a|A|149
23WI|1|a|U|150
23WI|1|a|A|151
23WI|1|a|A|152
23WI|1|a|C|153
*
23WI|1|a|G|168
23WI|1|a|C|169
23WI|1|a|U|170
23WI|1|a|A|171
23WI|1|a|A|172
23WI|1|a|U|173
23WI|1|a|A|174
23WI|1|a|C|175
Current chains
- Chain a
- RNA (1539-MER)
Nearby chains
- Chain t
- Small ribosomal subunit protein bS20
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