IL_23WI_170
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CGACC*GCAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_170 not in the Motif Atlas
- Geometric match to IL_8B0X_055
- Geometric discrepancy: 0.1766
- The information below is about IL_8B0X_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87767.4
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
23WI|1|a|C|1259
23WI|1|a|G|1260
23WI|1|a|A|1261
23WI|1|a|C|1262
23WI|1|a|C|1263
*
23WI|1|a|G|1272
23WI|1|a|C|1273
23WI|1|a|A|1274
23WI|1|a|A|1275
23WI|1|a|G|1276
Current chains
- Chain a
- RNA (1539-MER)
Nearby chains
- Chain n
- Small ribosomal subunit protein uS14
- Chain s
- Small ribosomal subunit protein uS19
Coloring options: