IL_28LN_007

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

G(PSU)UAU*ACGUC

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|A2|G|108
28LN|1|A2|PSU|109
28LN|1|A2|U|110
28LN|1|A2|A|111
28LN|1|A2|U|112
*
28LN|1|A2|A|349
28LN|1|A2|C|350
28LN|1|A2|G|351
28LN|1|A2|U|352
28LN|1|A2|C|353

Current chains

Chain A2

18S rRNA

Nearby chains

Chain AE

Small ribosomal subunit protein eS4, X isoform

Chain AI

40S ribosomal protein S8

Chain AL

Small ribosomal subunit protein uS17