IL_28LN_017

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UUUCGA*UG

Length

8 nucleotides

Bulged bases

28LN|1|A2|U|368, 28LN|1|A2|C|369

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|A2|U|366
28LN|1|A2|U|367
28LN|1|A2|U|368
28LN|1|A2|C|369
28LN|1|A2|G|370
28LN|1|A2|A|371
*
28LN|1|A2|U|393
28LN|1|A2|G|394

Current chains

Chain A2

18S rRNA

Nearby chains

Chain AI

40S ribosomal protein S8

Chain AL

Small ribosomal subunit protein uS17

Chain B5

Large subunit ribosomal RNA; LSU rRNA

Chain BR

60S ribosomal protein L19