IL_28LN_025
3D structure
- PDB id
- 28LN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- XBP1u-stalled RPL4 RNC in complex with NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GAG*CGAGG(A2M)UC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_28LN_025 not in the Motif Atlas
- Homologous match to IL_9H3G_182
- Geometric discrepancy: 0.1873
- The information below is about IL_9H3G_182
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_02511.3
- Basepair signature
- cWW-tSH-L-cWW-L-L-R-L
- Number of instances in this motif group
- 4
Unit IDs
28LN|1|A2|G|563
28LN|1|A2|A|564
28LN|1|A2|G|565
*
28LN|1|A2|C|585
28LN|1|A2|G|586
28LN|1|A2|A|587
28LN|1|A2|G|588
28LN|1|A2|G|589
28LN|1|A2|A2M|590
28LN|1|A2|U|591
28LN|1|A2|C|592
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AJ
- 40S ribosomal protein S9
- Chain Ae
- Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein
Coloring options: