IL_28LN_033

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGUAG*UCAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|A2|C|676
28LN|1|A2|G|677
28LN|1|A2|U|678
28LN|1|A2|A|679
28LN|1|A2|G|680
*
28LN|1|A2|U|1025
28LN|1|A2|C|1026
28LN|1|A2|A|1027
28LN|1|A2|A|1028
28LN|1|A2|G|1029

Current chains

Chain A2

18S rRNA

Nearby chains

Chain AL

Small ribosomal subunit protein uS17

Chain AN

40S ribosomal protein S13

Chain AW

40S ribosomal protein S15a

Chain AX

Small ribosomal subunit protein uS12

Chain B5

Large subunit ribosomal RNA; LSU rRNA