IL_28LN_059

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

ACCA*UCCCU

Length

9 nucleotides

Bulged bases

28LN|1|A2|C|1215, 28LN|1|A2|C|1216

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|A2|A|1214
28LN|1|A2|C|1215
28LN|1|A2|C|1216
28LN|1|A2|A|1217
*
28LN|1|A2|U|1681
28LN|1|A2|C|1682
28LN|1|A2|C|1683
28LN|1|A2|C|1684
28LN|1|A2|U|1685

Current chains

Chain A2

18S rRNA

Nearby chains

Chain AF

40S ribosomal protein S5

Chain AQ

40S ribosomal protein S16

Chain Aa

40S ribosomal protein S26

Chain Ac

40S ribosomal protein S28

Chain B2

Transfer RNA; tRNA