IL_28LN_064

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

ACAGGA(OMU)UG*CUCGAUU

Length

16 nucleotides

Bulged bases

28LN|1|A2|G|1285

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|A2|A|1282
28LN|1|A2|C|1283
28LN|1|A2|A|1284
28LN|1|A2|G|1285
28LN|1|A2|G|1286
28LN|1|A2|A|1287
28LN|1|A2|OMU|1288
28LN|1|A2|U|1289
28LN|1|A2|G|1290
*
28LN|1|A2|C|1309
28LN|1|A2|U|1310
28LN|1|A2|C|1311
28LN|1|A2|G|1312
28LN|1|A2|A|1313
28LN|1|A2|U|1314
28LN|1|A2|U|1315

Current chains

Chain A2

18S rRNA

Nearby chains

Chain AK

40S ribosomal protein S10

Chain AM

40S ribosomal protein S12

Chain Ad

40S ribosomal protein S29

Chain Af

Ubiquitin