IL_28LN_091
3D structure
- PDB id
- 28LN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- XBP1u-stalled RPL4 RNC in complex with NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UGAG*CGAA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_28LN_091 not in the Motif Atlas
- Homologous match to IL_9H3G_241
- Geometric discrepancy: 0.1417
- The information below is about IL_9H3G_241
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.5
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 50
Unit IDs
28LN|1|A2|U|1733
28LN|1|A2|G|1734
28LN|1|A2|A|1735
28LN|1|A2|G|1736
*
28LN|1|A2|C|1798
28LN|1|A2|G|1799
28LN|1|A2|A|1800
28LN|1|A2|A|1801
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AG
- 40S ribosomal protein S6
- Chain AI
- 40S ribosomal protein S8
Coloring options: