IL_28LN_107

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GCUCGUGG*CGGC

Length

12 nucleotides

Bulged bases

28LN|1|B5|C|185, 28LN|1|B5|G|188

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|B5|G|182
28LN|1|B5|C|183
28LN|1|B5|U|184
28LN|1|B5|C|185
28LN|1|B5|G|186
28LN|1|B5|U|187
28LN|1|B5|G|188
28LN|1|B5|G|189
*
28LN|1|B5|C|252
28LN|1|B5|G|253
28LN|1|B5|G|254
28LN|1|B5|C|255

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BC

60S ribosomal protein L4

Chain BL

60S ribosomal protein L13

Chain Bh

60S ribosomal protein L35

Chain Bj

Large ribosomal subunit protein eL37