IL_28LN_112
3D structure
- PDB id
- 28LN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- XBP1u-stalled RPL4 RNC in complex with NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GAAC*GAGUUCAAGAGGGC
- Length
- 18 nucleotides
- Bulged bases
- 28LN|1|B5|G|409, 28LN|1|B5|G|413
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
28LN|1|B5|G|387
28LN|1|B5|A|388
28LN|1|B5|A|389
28LN|1|B5|C|390
*
28LN|1|B5|G|401
28LN|1|B5|A|402
28LN|1|B5|G|403
28LN|1|B5|U|404
28LN|1|B5|U|405
28LN|1|B5|C|406
28LN|1|B5|A|407
28LN|1|B5|A|408
28LN|1|B5|G|409
28LN|1|B5|A|410
28LN|1|B5|G|411
28LN|1|B5|G|412
28LN|1|B5|G|413
28LN|1|B5|C|414
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain B1
- Large ribosomal subunit protein uL4,X-box-binding protein 1, luminal form,X-box-binding protein 1, luminal form,X-box-binding protein 1, luminal form
- Chain B8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BP
- 60S ribosomal protein L17
- Chain BY
- 60S ribosomal protein L26
- Chain Bl
- 60S ribosomal protein L39
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