IL_28LN_113

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GUGAAAC*G(OMU)GGAUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|B5|G|415
28LN|1|B5|U|416
28LN|1|B5|G|417
28LN|1|B5|A|418
28LN|1|B5|A|419
28LN|1|B5|A|420
28LN|1|B5|C|421
*
28LN|1|B8|G|13
28LN|1|B8|OMU|14
28LN|1|B8|G|15
28LN|1|B8|G|16
28LN|1|B8|A|17
28LN|1|B8|U|18
28LN|1|B8|C|19

Current chains

Chain B5

28S rRNA

Chain B8

5.8S rRNA

Nearby chains

Chain BC

60S ribosomal protein L4

Chain BP

60S ribosomal protein L17

Chain Be

60S ribosomal protein L32