IL_28LN_129

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AAGG*CAGCAGCACU

Length

14 nucleotides

Bulged bases

28LN|1|B5|A|931, 28LN|1|B5|A|934, 28LN|1|B5|C|935

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|B5|A|732
28LN|1|B5|A|733
28LN|1|B5|G|734
28LN|1|B5|G|735
*
28LN|1|B5|C|927
28LN|1|B5|A|928
28LN|1|B5|G|929
28LN|1|B5|C|930
28LN|1|B5|A|931
28LN|1|B5|G|932
28LN|1|B5|C|933
28LN|1|B5|A|934
28LN|1|B5|C|935
28LN|1|B5|U|936

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BC

60S ribosomal protein L4

Chain BM

60S ribosomal protein L14

Chain BS

60S ribosomal protein L18a