IL_28LN_140

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGGGG*CGCCGUG

Length

12 nucleotides

Bulged bases

28LN|1|B5|G|1358, 28LN|1|B5|C|1377

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|B5|C|1356
28LN|1|B5|G|1357
28LN|1|B5|G|1358
28LN|1|B5|G|1359
28LN|1|B5|G|1360
*
28LN|1|B5|C|1375
28LN|1|B5|G|1376
28LN|1|B5|C|1377
28LN|1|B5|C|1378
28LN|1|B5|G|1379
28LN|1|B5|U|1380
28LN|1|B5|G|1381

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BC

60S ribosomal protein L4

Chain BL

60S ribosomal protein L13

Chain BN

60S ribosomal protein L15

Chain Ba

Large ribosomal subunit protein uL15