IL_28LN_151
3D structure
- PDB id
- 28LN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- XBP1u-stalled RPL4 RNC in complex with NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CGAAG*UGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_28LN_151 not in the Motif Atlas
- Homologous match to IL_8GLP_059
- Geometric discrepancy: 0.0868
- The information below is about IL_8GLP_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_15190.5
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 29
Unit IDs
28LN|1|B5|C|1550
28LN|1|B5|G|1551
28LN|1|B5|A|1552
28LN|1|B5|A|1553
28LN|1|B5|G|1554
*
28LN|1|B5|U|1571
28LN|1|B5|G|1572
28LN|1|B5|G|1573
28LN|1|B5|A|1574
28LN|1|B5|G|1575
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BA
- Large ribosomal subunit protein uL2
- Chain BR
- 60S ribosomal protein L19
- Chain Bp
- 60S ribosomal protein L37a
Coloring options: