IL_28LN_155
3D structure
- PDB id
- 28LN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- XBP1u-stalled RPL4 RNC in complex with NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UUU*A(PSU)A
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_28LN_155 not in the Motif Atlas
- Homologous match to IL_9H3G_040
- Geometric discrepancy: 0.0833
- The information below is about IL_9H3G_040
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_71625.6
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 81
Unit IDs
28LN|1|B5|U|1670
28LN|1|B5|U|1671
28LN|1|B5|U|1672
*
28LN|1|B5|A|1681
28LN|1|B5|PSU|1682
28LN|1|B5|A|1683
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BL
- 60S ribosomal protein L13
- Chain BQ
- 60S ribosomal protein L18
- Chain BT
- 60S ribosomal protein L21
- Chain Ba
- Large ribosomal subunit protein uL15
- Chain Bb
- Large ribosomal subunit protein eL29
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