IL_28LN_157

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUCGCAGACCCGACGCACCCCCGCCACG*CG

Length

30 nucleotides

Bulged bases

28LN|1|B5|C|1701, 28LN|1|B5|A|1718

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|B5|C|1693
28LN|1|B5|U|1694
28LN|1|B5|C|1695
28LN|1|B5|G|1696
28LN|1|B5|C|1697
28LN|1|B5|A|1698
28LN|1|B5|G|1699
28LN|1|B5|A|1700
28LN|1|B5|C|1701
28LN|1|B5|C|1702
28LN|1|B5|C|1703
28LN|1|B5|G|1704
28LN|1|B5|A|1705
28LN|1|B5|C|1706
28LN|1|B5|G|1707
28LN|1|B5|C|1708
28LN|1|B5|A|1709
28LN|1|B5|C|1710
28LN|1|B5|C|1711
28LN|1|B5|C|1712
28LN|1|B5|C|1713
28LN|1|B5|C|1714
28LN|1|B5|G|1715
28LN|1|B5|C|1716
28LN|1|B5|C|1717
28LN|1|B5|A|1718
28LN|1|B5|C|1719
28LN|1|B5|G|1720
*
28LN|1|B5|C|1840
28LN|1|B5|G|1841

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BC

60S ribosomal protein L4

Chain BF

Large ribosomal subunit protein uL30

Chain BQ

60S ribosomal protein L18

Chain BT

60S ribosomal protein L21

Chain Bb

Large ribosomal subunit protein eL29