IL_28LN_168

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGCCCGAUGC*GGG

Length

13 nucleotides

Bulged bases

28LN|1|B5|G|1918

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|B5|C|1910
28LN|1|B5|G|1911
28LN|1|B5|C|1912
28LN|1|B5|C|1913
28LN|1|B5|C|1914
28LN|1|B5|G|1915
28LN|1|B5|A|1916
28LN|1|B5|U|1917
28LN|1|B5|G|1918
28LN|1|B5|C|1919
*
28LN|1|B5|G|2062
28LN|1|B5|G|2063
28LN|1|B5|G|2064

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BF

Large ribosomal subunit protein uL30

Chain BO

60S ribosomal protein L13a

Chain BS

60S ribosomal protein L18a

Chain Bf

60S ribosomal protein L35a