IL_28LN_171
3D structure
- PDB id
- 28LN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- XBP1u-stalled RPL4 RNC in complex with NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GACCCCAGAAAA*UGAAAAUGGAUGGCGC
- Length
- 28 nucleotides
- Bulged bases
- 28LN|1|B5|C|1934, 28LN|1|B5|U|2043, 28LN|1|B5|G|2044
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
28LN|1|B5|G|1932
28LN|1|B5|A|1933
28LN|1|B5|C|1934
28LN|1|B5|C|1935
28LN|1|B5|C|1936
28LN|1|B5|C|1937
28LN|1|B5|A|1938
28LN|1|B5|G|1939
28LN|1|B5|A|1940
28LN|1|B5|A|1941
28LN|1|B5|A|1942
28LN|1|B5|A|1943
*
28LN|1|B5|U|2037
28LN|1|B5|G|2038
28LN|1|B5|A|2039
28LN|1|B5|A|2040
28LN|1|B5|A|2041
28LN|1|B5|A|2042
28LN|1|B5|U|2043
28LN|1|B5|G|2044
28LN|1|B5|G|2045
28LN|1|B5|A|2046
28LN|1|B5|U|2047
28LN|1|B5|G|2048
28LN|1|B5|G|2049
28LN|1|B5|C|2050
28LN|1|B5|G|2051
28LN|1|B5|C|2052
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain B7
- 5S ribosomal RNA; 5S rRNA
- Chain BB
- Large ribosomal subunit protein uL3
- Chain BI
- 60S ribosomal protein L10
- Chain BO
- 60S ribosomal protein L13a
- Chain Bf
- 60S ribosomal protein L35a
- Chain Bm
- Ubiquitin-60S ribosomal protein L40
Coloring options: