IL_28LN_180

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CCUUGAAG*UGGAG

Length

13 nucleotides

Bulged bases

28LN|1|B5|U|2304

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|B5|C|2301
28LN|1|B5|C|2302
28LN|1|B5|U|2303
28LN|1|B5|U|2304
28LN|1|B5|G|2305
28LN|1|B5|A|2306
28LN|1|B5|A|2307
28LN|1|B5|G|2308
*
28LN|1|B5|U|2328
28LN|1|B5|G|2329
28LN|1|B5|G|2330
28LN|1|B5|A|2331
28LN|1|B5|G|2332

Current chains

Chain B5

28S rRNA

Nearby chains

Chain B8

5.8S ribosomal RNA; 5.8S rRNA

Chain BC

60S ribosomal protein L4

Chain BY

60S ribosomal protein L26

Chain Be

60S ribosomal protein L32