IL_28LN_185

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUGAG*CGAAAG

Length

11 nucleotides

Bulged bases

28LN|1|B5|A|2511, 28LN|1|B5|A|2512

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|B5|C|2445
28LN|1|B5|U|2446
28LN|1|B5|G|2447
28LN|1|B5|A|2448
28LN|1|B5|G|2449
*
28LN|1|B5|C|2508
28LN|1|B5|G|2509
28LN|1|B5|A|2510
28LN|1|B5|A|2511
28LN|1|B5|A|2512
28LN|1|B5|G|2513

Current chains

Chain B5

28S rRNA

Nearby chains

Chain B8

5.8S ribosomal RNA; 5.8S rRNA

Chain BA

Large ribosomal subunit protein uL2

Chain Bg

60S ribosomal protein L34

Chain Bj

Large ribosomal subunit protein eL37

Chain Bl

60S ribosomal protein L39