IL_28LN_198

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGAAGUCGG*CUGU(OMC)

Length

14 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|B5|G|2846
28LN|1|B5|G|2847
28LN|1|B5|A|2848
28LN|1|B5|A|2849
28LN|1|B5|G|2850
28LN|1|B5|U|2851
28LN|1|B5|C|2852
28LN|1|B5|G|2853
28LN|1|B5|G|2854
*
28LN|1|B5|C|3836
28LN|1|B5|U|3837
28LN|1|B5|G|3838
28LN|1|B5|U|3839
28LN|1|B5|OMC|3840

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BB

Large ribosomal subunit protein uL3

Chain BV

60S ribosomal protein L23