IL_28LN_199
3D structure
- PDB id
- 28LN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- XBP1u-stalled RPL4 RNC in complex with NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- AGUCGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 28LN|1|B5|G|3838
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_28LN_199 not in the Motif Atlas
- Homologous match to IL_9PN5_076
- Geometric discrepancy: 0.0933
- The information below is about IL_9PN5_076
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28217.4
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 12
Unit IDs
28LN|1|B5|A|2849
28LN|1|B5|G|2850
28LN|1|B5|U|2851
28LN|1|B5|C|2852
28LN|1|B5|G|2853
28LN|1|B5|G|2854
*
28LN|1|B5|C|3836
28LN|1|B5|U|3837
28LN|1|B5|G|3838
28LN|1|B5|U|3839
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BB
- Large ribosomal subunit protein uL3
- Chain BV
- 60S ribosomal protein L23
Coloring options: