IL_28LN_222

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

U(PSU)GA*(PSU)ACA

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|B5|U|4294
28LN|1|B5|PSU|4295
28LN|1|B5|G|4296
28LN|1|B5|A|4297
*
28LN|1|B5|PSU|4311
28LN|1|B5|A|4312
28LN|1|B5|C|4313
28LN|1|B5|A|4314

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BD

60S ribosomal protein L5

Chain BQ

60S ribosomal protein L18

Chain BT

60S ribosomal protein L21

Chain Bb

Large ribosomal subunit protein eL29

Chain Bo

Large ribosomal subunit protein eL42