IL_28LN_248
3D structure
- PDB id
- 28LN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- XBP1u-stalled RPL4 RNC in complex with NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CUCGGAUAG*UGCGGAGUG
- Length
- 18 nucleotides
- Bulged bases
- 28LN|1|B5|U|4757, 28LN|1|B5|A|4763, 28LN|1|B5|G|4869, 28LN|1|B5|C|4870
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
28LN|1|B5|C|4756
28LN|1|B5|U|4757
28LN|1|B5|C|4758
28LN|1|B5|G|4759
28LN|1|B5|G|4760
28LN|1|B5|A|4761
28LN|1|B5|U|4762
28LN|1|B5|A|4763
28LN|1|B5|G|4764
*
28LN|1|B5|U|4868
28LN|1|B5|G|4869
28LN|1|B5|C|4870
28LN|1|B5|G|4871
28LN|1|B5|G|4872
28LN|1|B5|A|4873
28LN|1|B5|G|4874
28LN|1|B5|U|4875
28LN|1|B5|G|4876
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BE
- Large ribosomal subunit protein eL6
- Chain BH
- 60S ribosomal protein L9
- Chain BM
- 60S ribosomal protein L14
- Chain BO
- 60S ribosomal protein L13a
- Chain BS
- 60S ribosomal protein L18a
- Chain Bf
- 60S ribosomal protein L35a
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