IL_28UI_136

3D structure

PDB id

28UI (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome, trapped conformational excited state of SSU-h44 apical loop, with A- and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28UI|1|a|U|1851
28UI|1|a|U|1852
28UI|1|a|A|1853
28UI|1|a|A|1854
28UI|1|a|U|1855
28UI|1|a|U|1856
28UI|1|a|G|1857
28UI|1|a|A|1858
28UI|1|a|U|1859
28UI|1|a|G|1860
*
28UI|1|a|U|1882
28UI|1|a|U|1883
28UI|1|a|G|1884
28UI|1|a|A|1885
28UI|1|a|U|1886
28UI|1|a|C|1887
28UI|1|a|G|1888
28UI|1|a|A|1889
28UI|1|a|A|1890
28UI|1|a|G|1891

Current chains

Chain a

23S rRNA

Nearby chains