IL_28UI_147
3D structure
- PDB id
- 28UI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome, trapped conformational excited state of SSU-h44 apical loop, with A- and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- AAU*AGGUU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_28UI_147 not in the Motif Atlas
- Geometric match to IL_8B0X_147
- Geometric discrepancy: 0.0554
- The information below is about IL_8B0X_147
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14250.3
- Basepair signature
- cWW-tSH-L-cWW-L
- Number of instances in this motif group
- 11
Unit IDs
28UI|1|a|A|2297
28UI|1|a|A|2298
28UI|1|a|U|2299
*
28UI|1|a|A|2317
28UI|1|a|G|2318
28UI|1|a|G|2319
28UI|1|a|U|2320
28UI|1|a|U|2321
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain b
- 5S ribosomal RNA; 5S rRNA
- Chain f
- Large ribosomal subunit protein uL5
Coloring options: