IL_28UK_136

3D structure

PDB id

28UK (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome, conformational ground state mutation in SSU-h41, with A- and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.24 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28UK|1|a|U|1851
28UK|1|a|U|1852
28UK|1|a|A|1853
28UK|1|a|A|1854
28UK|1|a|U|1855
28UK|1|a|U|1856
28UK|1|a|G|1857
28UK|1|a|A|1858
28UK|1|a|U|1859
28UK|1|a|G|1860
*
28UK|1|a|U|1882
28UK|1|a|U|1883
28UK|1|a|G|1884
28UK|1|a|A|1885
28UK|1|a|U|1886
28UK|1|a|C|1887
28UK|1|a|G|1888
28UK|1|a|A|1889
28UK|1|a|A|1890
28UK|1|a|G|1891

Current chains

Chain a

23S rRNA

Nearby chains