IL_28UL_136

3D structure

PDB id

28UL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome, conformational ground state mutation in SSU-h41, with A/P- and P/E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28UL|1|a|U|1851
28UL|1|a|U|1852
28UL|1|a|A|1853
28UL|1|a|A|1854
28UL|1|a|U|1855
28UL|1|a|U|1856
28UL|1|a|G|1857
28UL|1|a|A|1858
28UL|1|a|U|1859
28UL|1|a|G|1860
*
28UL|1|a|U|1882
28UL|1|a|U|1883
28UL|1|a|G|1884
28UL|1|a|A|1885
28UL|1|a|U|1886
28UL|1|a|C|1887
28UL|1|a|G|1888
28UL|1|a|A|1889
28UL|1|a|A|1890
28UL|1|a|G|1891

Current chains

Chain a

23S rRNA

Nearby chains

Chain Z

Transfer RNA; tRNA