IL_28UN_135

3D structure

PDB id

28UN (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome, conformational excited state mutation in SSU-h41, with A/P- and P/E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28UN|1|a|U|1851
28UN|1|a|U|1852
28UN|1|a|A|1853
28UN|1|a|A|1854
28UN|1|a|U|1855
28UN|1|a|U|1856
28UN|1|a|G|1857
28UN|1|a|A|1858
28UN|1|a|U|1859
28UN|1|a|G|1860
*
28UN|1|a|U|1882
28UN|1|a|U|1883
28UN|1|a|G|1884
28UN|1|a|A|1885
28UN|1|a|U|1886
28UN|1|a|C|1887
28UN|1|a|G|1888
28UN|1|a|A|1889
28UN|1|a|A|1890
28UN|1|a|G|1891

Current chains

Chain a

23S rRNA

Nearby chains

Chain Z

Transfer RNA; tRNA