IL_28ZU_056

3D structure

PDB id

28ZU (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with Kozak mRNA and eIF1A W70A mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGAGUA(PSU)G*(PSU)GAAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZU|1|S2|G|1168
28ZU|1|S2|G|1169
28ZU|1|S2|A|1170
28ZU|1|S2|G|1171
28ZU|1|S2|U|1172
28ZU|1|S2|A|1173
28ZU|1|S2|PSU|1174
28ZU|1|S2|G|1175
*
28ZU|1|S2|PSU|1186
28ZU|1|S2|G|1187
28ZU|1|S2|A|1188
28ZU|1|S2|A|1189
28ZU|1|S2|A|1190
28ZU|1|S2|C|1191

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain Ln

60S ribosomal protein L41

Chain SX

40S ribosomal protein S23