IL_28ZV_018

3D structure

PDB id

28ZV (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with mRNA (non-Kozak)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UAUCAA*UGACCACG

Length

14 nucleotides

Bulged bases

28ZV|1|S2|U|361, 28ZV|1|S2|C|399, 28ZV|1|S2|C|400

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZV|1|S2|U|359
28ZV|1|S2|A|360
28ZV|1|S2|U|361
28ZV|1|S2|C|362
28ZV|1|S2|A|363
28ZV|1|S2|A|364
*
28ZV|1|S2|U|396
28ZV|1|S2|G|397
28ZV|1|S2|A|398
28ZV|1|S2|C|399
28ZV|1|S2|C|400
28ZV|1|S2|A|401
28ZV|1|S2|C|402
28ZV|1|S2|G|403

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SI

40S ribosomal protein S8

Chain SL

Small ribosomal subunit protein uS17

Chain SX

40S ribosomal protein S23