IL_28ZV_048

3D structure

PDB id

28ZV (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with mRNA (non-Kozak)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCUAG*CUUGGACC

Length

13 nucleotides

Bulged bases

28ZV|1|S2|G|970

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZV|1|S2|G|952
28ZV|1|S2|C|953
28ZV|1|S2|U|954
28ZV|1|S2|A|955
28ZV|1|S2|G|956
*
28ZV|1|S2|C|967
28ZV|1|S2|U|968
28ZV|1|S2|U|969
28ZV|1|S2|G|970
28ZV|1|S2|G|971
28ZV|1|S2|A|972
28ZV|1|S2|C|973
28ZV|1|S2|C|974

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain D

Eukaryotic translation initiation factor 2 subunit 1

Chain SB

40S ribosomal protein S3a

Chain SO

40S ribosomal protein S14