IL_28ZV_070

3D structure

PDB id

28ZV (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with mRNA (non-Kozak)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAUGC*(OMG)AGG

Length

9 nucleotides

Bulged bases

28ZV|1|S2|U|1397

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZV|1|S2|C|1395
28ZV|1|S2|A|1396
28ZV|1|S2|U|1397
28ZV|1|S2|G|1398
28ZV|1|S2|C|1399
*
28ZV|1|S2|OMG|1447
28ZV|1|S2|A|1448
28ZV|1|S2|G|1449
28ZV|1|S2|G|1450

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SQ

40S ribosomal protein S16

Chain SR

40S ribosomal protein S17

Chain SU

40S ribosomal protein S20

Chain Sg

Receptor of activated protein C kinase 1