IL_28ZV_079

3D structure

PDB id

28ZV (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with mRNA (non-Kozak)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

28ZV|1|S2|C|1701, 28ZV|1|S2|A|1835

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZV|1|S2|C|1700
28ZV|1|S2|C|1701
28ZV|1|S2|G|1702
*
28ZV|1|S2|C|1833
28ZV|1|S2|A|1834
28ZV|1|S2|A|1835
28ZV|1|S2|G|1836

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain B

mRNA

Chain G

Transfer RNA; tRNA

Chain H

Eukaryotic translation initiation factor 1A, X-chromosomal

Chain SO

40S ribosomal protein S14

Chain Sa

40S ribosomal protein S26