Motif IL_18228.4 Version IL_18228.4 of this group appears in releases 4.14 to 4.14
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | 1-5 | 3-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4LFB_056 | 4LFB | 0.2217 | 2 | A | SSU rRNA | C | 1501 | A | 1502 | G | 1504 | * | C | 1399 | G | 1401 | cWW | cWW |
| 2 | IL_9H3G_233 | 9H3G | 0.0481 | 2 | h1 | SSU rRNA | C | 1768 | A | 1769 | G | 1771 | * | C | 1638 | G | 1640 | cWW | cWW |
| 3 | IL_8B0X_057 | 8B0X | 0.0466 | 2 | A | SSU rRNA | C | 1501 | A | 1502 | G | 1504 | * | C | 1399 | G | 1401 | cWW | cWW |
| 4 | IL_9PN5_220 | 9PN5 | 0.0000 | 2 | B5 | SSU rRNA | C | 1764 | A | 1765 | G | 1767 | * | C | 1636 | G | 1638 | cWW | cWW |
| 5 | IL_9SUM_216 | 9SUM | 0.0535 | 2 | CA | SSU rRNA | C | 1739 | A | 1740 | G | 1742 | * | C | 1611 | G | 1613 | cWW | cWW |
| 6 | IL_8GLP_274 | 8GLP | 0.0575 | 2 | S2 | SSU rRNA | C | 1833 | A | 1834 | G | 1836 | * | C | 1700 | G | 1702 | cWW | cWW |
| 7 | IL_8CRE_466 | 8CRE | 0.0705 | 2 | CM | SSU rRNA | C | 1751 | A | 1752 | G | 1754 | * | C | 1623 | G | 1625 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAAG*CCG | 6 |
| CAAG*C(5MC)G | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AA*C | 6 |
| AA*(5MC) | 1 |
Release history
| Release | 4.14 |
|---|---|
| Date | 2026-09-09 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (7)
- Basepair signature
- cWW-L-cWW
- Heat map statistics
- Min 0.03 | Avg 0.09 | Max 0.25
Coloring options: