IL_28ZX_007
3D structure
- PDB id
- 28ZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 48S PIC with mRNA (Kozak_1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- (PSU)ACGCA*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- 28ZX|1|S2|C|65, 28ZX|1|S2|C|67
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_28ZX_007 not in the Motif Atlas
- Homologous match to IL_9H3G_161
- Geometric discrepancy: 0.1685
- The information below is about IL_9H3G_161
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_21667.4
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
28ZX|1|S2|PSU|63
28ZX|1|S2|A|64
28ZX|1|S2|C|65
28ZX|1|S2|G|66
28ZX|1|S2|C|67
28ZX|1|S2|A|68
*
28ZX|1|S2|U|81
28ZX|1|S2|G|82
28ZX|1|S2|A|83
28ZX|1|S2|A|84
28ZX|1|S2|A|85
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SG
- 40S ribosomal protein S6
- Chain SY
- 40S ribosomal protein S24
Coloring options: