IL_28ZX_030

3D structure

PDB id

28ZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with mRNA (Kozak_1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGACUC*GAGGCC

Length

12 nucleotides

Bulged bases

28ZX|1|S2|A|545

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZX|1|S2|G|534
28ZX|1|S2|G|535
28ZX|1|S2|A|536
28ZX|1|S2|C|537
28ZX|1|S2|U|538
28ZX|1|S2|C|539
*
28ZX|1|S2|G|544
28ZX|1|S2|A|545
28ZX|1|S2|G|546
28ZX|1|S2|G|547
28ZX|1|S2|C|548
28ZX|1|S2|C|549

Current chains

Chain S2

18S rRNA

Nearby chains

Chain Se

Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein