IL_28ZX_039

3D structure

PDB id

28ZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with mRNA (Kozak_1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CGUAG*UCAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZX|1|S2|C|676
28ZX|1|S2|G|677
28ZX|1|S2|U|678
28ZX|1|S2|A|679
28ZX|1|S2|G|680
*
28ZX|1|S2|U|1025
28ZX|1|S2|C|1026
28ZX|1|S2|A|1027
28ZX|1|S2|A|1028
28ZX|1|S2|G|1029

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SL

Small ribosomal subunit protein uS17

Chain SN

40S ribosomal protein S13

Chain SW

40S ribosomal protein S15a

Chain SX

40S ribosomal protein S23